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  • Negative cofitness for CSW01_12980 from Vibrio cholerae E7946 ATCC 55056

    ATP-dependent RNA helicase DbpA
    SEED: ATP-dependent 23S rRNA helicase DbpA
    KEGG: ATP-independent RNA helicase DbpA

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_01155 DNA repair protein RadC -0.53
    2 CSW01_14615 type VI secretion system membrane subunit TssM -0.50
    3 CSW01_14660 ribose ABC transporter substrate-binding protein RbsB -0.49
    4 CSW01_00910 ABC transporter ATP-binding protein -0.48
    5 CSW01_08720 arginyltransferase -0.45
    6 CSW01_12030 glutamate synthase large subunit -0.45
    7 CSW01_16330 DUF2971 domain-containing protein -0.43
    8 CSW01_14515 rhodanese-like domain-containing protein -0.43
    9 CSW01_06860 siroheme synthase -0.42
    10 CSW01_14910 cold-shock protein -0.42
    11 CSW01_15840 hypothetical protein -0.42
    12 CSW01_18355 aldehyde dehydrogenase -0.41
    13 CSW01_18450 hypothetical protein -0.41
    14 CSW01_04865 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -0.40
    15 CSW01_08420 efflux RND transporter periplasmic adaptor subunit -0.40
    16 CSW01_15190 L-ribulose-5-phosphate 4-epimerase -0.40
    17 CSW01_12765 outer membrane lipid asymmetry maintenance protein MlaD -0.39
    18 CSW01_16560 toxin HigB-2 -0.39
    19 CSW01_05500 response regulator -0.39
    20 CSW01_19365 LysR family transcriptional regulator -0.39

    Or look for positive cofitness