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  • Negative cofitness for CSW01_12900 from Vibrio cholerae E7946 ATCC 55056

    DUF490 domain-containing protein
    SEED: Uncharacterized protein YtfN
    KEGG: hypothetical protein

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_19105 TetR/AcrR family transcriptional regulator -0.56
    2 CSW01_06055 DUF3334 domain-containing protein -0.52
    3 CSW01_14495 NUDIX hydrolase -0.52
    4 CSW01_08075 TolC family protein -0.50
    5 CSW01_11820 RimK family alpha-L-glutamate ligase -0.48
    6 CSW01_05085 hypothetical protein -0.47
    7 CSW01_13550 O-succinylhomoserine (thiol)-lyase -0.47
    8 CSW01_08080 HlyD family secretion protein -0.45
    9 CSW01_14605 type VI secretion system-associated protein TagO -0.44
    10 CSW01_13690 two-component system sensor histidine kinase EnvZ -0.44
    11 CSW01_14295 lactate dehydrogenase -0.43
    12 CSW01_07355 DNA-binding protein -0.42
    13 CSW01_09290 ATP-dependent DNA helicase DinG -0.42
    14 CSW01_13605 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL -0.42
    15 CSW01_13250 aspartate aminotransferase family protein -0.42
    16 CSW01_14135 type VI secretion system tube protein Hcp -0.42
    17 CSW01_04520 aminobenzoyl-glutamate transporter -0.42
    18 CSW01_06940 hypothetical protein -0.41
    19 CSW01_18020 DEAD/DEAH box helicase -0.41
    20 CSW01_14145 DUF4123 domain-containing protein -0.41

    Or look for positive cofitness