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  • Negative cofitness for CSW01_12820 from Vibrio cholerae E7946 ATCC 55056

    ribosome hibernation promoting factor
    SEED: Ribosome hibernation protein YhbH
    KEGG: putative sigma-54 modulation protein

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_09125 PTS fructose transporter subunit IIA -0.59
    2 CSW01_15695 DUF3265 domain-containing protein -0.49
    3 CSW01_12040 DUF1499 domain-containing protein -0.47
    4 CSW01_02880 regulatory protein RecX -0.46
    5 CSW01_06850 amino acid ABC transporter permease -0.45
    6 CSW01_07820 RidA family protein -0.45
    7 CSW01_13005 hypothetical protein -0.44
    8 CSW01_04890 hypothetical protein -0.44
    9 CSW01_06250 peptide-methionine (R)-S-oxide reductase -0.43
    10 CSW01_06110 dsDNA-mimic protein -0.43
    11 CSW01_19175 hypothetical protein -0.43
    12 CSW01_12750 BolA family transcriptional regulator -0.43
    13 CSW01_04180 hypothetical protein -0.41
    14 CSW01_14440 redox-sensitive transcriptional activator SoxR -0.41
    15 CSW01_14640 DUF3012 domain-containing protein -0.41
    16 CSW01_10570 50S ribosomal protein L3 N(5)-glutamine methyltransferase -0.41
    17 CSW01_14775 Na+/H+ antiporter subunit D -0.41
    18 CSW01_11335 23S rRNA pseudouridine(2604) synthase RluF -0.41
    19 CSW01_17355 D-3-phosphoglycerate dehydrogenase -0.41
    20 CSW01_14160 glutathione S-transferase -0.40

    Or look for positive cofitness