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  • Negative cofitness for CSW01_12705 from Vibrio cholerae E7946 ATCC 55056

    RNA polymerase-associated protein RapA
    SEED: RNA polymerase associated protein RapA (EC 3.6.1.-)
    KEGG: ATP-dependent helicase HepA

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_18410 ABC transporter ATP-binding protein -0.65
    2 CSW01_08235 DNA-binding response regulator -0.64
    3 CSW01_04265 toxin coregulated pilin -0.63
    4 CSW01_14470 DUF134 domain-containing protein -0.62
    5 CSW01_14340 S9 family peptidase -0.62
    6 CSW01_08925 sialic acid-binding protein -0.61
    7 CSW01_16505 DUF645 domain-containing protein -0.61
    8 CSW01_01380 D-2-hydroxyacid dehydrogenase -0.61
    9 CSW01_01095 N-acetylmuramic acid 6-phosphate etherase -0.60
    10 CSW01_13495 MATE family efflux transporter -0.60
    11 CSW01_13300 3-dehydroquinate synthase -0.59
    12 CSW01_01365 MBL fold hydrolase -0.59
    13 CSW01_01025 LysE family translocator -0.58
    14 CSW01_03155 RNA polymerase-binding transcription factor DksA -0.58
    15 CSW01_14050 ribosomal RNA small subunit methyltransferase G -0.58
    16 CSW01_13525 DNA-binding transcriptional regulator CytR -0.58
    17 CSW01_13470 transcriptional regulator -0.58
    18 CSW01_17855 autoinducer 2 sensor kinase/phosphatase LuxQ -0.57
    19 CSW01_03105 hypoxanthine phosphoribosyltransferase -0.57
    20 CSW01_19350 sulfite exporter TauE/SafE family protein -0.57

    Or look for positive cofitness