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  • Negative cofitness for CSW01_12575 from Vibrio cholerae E7946 ATCC 55056

    transcriptional regulator LeuO
    SEED: Probable transcriptional activator for leuABCD operon
    KEGG: LysR family transcriptional regulator, transcriptional activator for leuABCD operon

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_17855 autoinducer 2 sensor kinase/phosphatase LuxQ -0.72
    2 CSW01_04660 PTS trehalose transporter subunit IIBC -0.66
    3 CSW01_01215 capsular biosynthesis protein -0.66
    4 CSW01_06910 molecular chaperone DnaK -0.66
    5 CSW01_13410 protein-export protein SecB -0.64
    6 CSW01_10180 Na+/H+ antiporter NhaC -0.64
    7 CSW01_10175 Aspartate-semialdehyde dehydrogenase 1 -0.62
    8 CSW01_09515 Na+/H+ antiporter NhaB -0.62
    9 CSW01_10165 bifunctional acetaldehyde-CoA/alcohol dehydrogenase -0.61
    10 CSW01_01365 MBL fold hydrolase -0.61
    11 CSW01_02840 DNA mismatch repair protein MutS -0.60
    12 CSW01_13210 TIGR02444 family protein -0.60
    13 CSW01_13470 transcriptional regulator -0.60
    14 CSW01_06085 urocanate hydratase -0.59
    15 CSW01_03220 phosphonomutase -0.59
    16 CSW01_13980 LysR family transcriptional regulator -0.58
    17 CSW01_17140 urease -0.58
    18 CSW01_10085 beta-ketoacyl-[acyl-carrier-protein] synthase II -0.58
    19 CSW01_14115 glycogen/starch/alpha-glucan phosphorylase -0.58
    20 CSW01_15275 hypothetical protein -0.58

    Or look for positive cofitness