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  • Negative cofitness for CSW01_12260 from Vibrio cholerae E7946 ATCC 55056

    1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
    SEED: N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD
    KEGG: AmpD protein

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_19155 glutaredoxin -0.53
    2 CSW01_05085 hypothetical protein -0.53
    3 CSW01_05250 zinc/cadmium/mercury/lead-transporting ATPase -0.53
    4 CSW01_15000 rfbP protein -0.50
    5 CSW01_07140 spermidine/putrescine ABC transporter substrate-binding protein -0.49
    6 CSW01_06105 DUF3187 domain-containing protein -0.49
    7 CSW01_09670 bifunctional diguanylate cyclase/phosphodiesterase -0.49
    8 CSW01_03435 protease -0.48
    9 CSW01_04825 hypothetical protein -0.47
    10 CSW01_08920 C4-dicarboxylate ABC transporter permease -0.47
    11 CSW01_01520 acetyl-coenzyme A synthetase -0.47
    12 CSW01_09630 sensor histidine kinase -0.46
    13 CSW01_03815 peroxidase -0.46
    14 CSW01_01430 Zn(2+)-responsive transcriptional regulator -0.46
    15 CSW01_11710 transcriptional regulator -0.46
    16 CSW01_14750 peptide deformylase -0.45
    17 CSW01_09675 CDP-alcohol phosphatidyltransferase family protein -0.45
    18 CSW01_14860 DUF58 domain-containing protein -0.45
    19 CSW01_08525 formate transporter FocA -0.44
    20 CSW01_09970 peptide-methionine (R)-S-oxide reductase -0.44

    Or look for positive cofitness