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  • Negative cofitness for CSW01_12250 from Vibrio cholerae E7946 ATCC 55056

    site-specific tyrosine recombinase XerD
    SEED: Tyrosine recombinase XerD
    KEGG: integrase/recombinase XerD

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_03100 TetR/AcrR family transcriptional regulator -0.74
    2 CSW01_03525 phosphoenolpyruvate-protein phosphotransferase PtsP -0.65
    3 CSW01_01545 hybrid sensor histidine kinase/response regulator -0.65
    4 CSW01_00790 vitamin B12 transporter BtuB -0.63
    5 CSW01_18300 LysR family transcriptional regulator -0.63
    6 CSW01_04590 transcriptional regulator GcvA -0.62
    7 CSW01_01410 DUF1481 domain-containing protein -0.56
    8 CSW01_05795 cold-shock protein CspD -0.54
    9 CSW01_00395 ribosomal RNA small subunit methyltransferase J -0.53
    10 CSW01_14530 SulP family inorganic anion transporter -0.52
    11 CSW01_05425 hypothetical protein -0.52
    12 CSW01_03670 biofilm architecture maintenance protein MbaA -0.51
    13 CSW01_02060 methionine synthase -0.51
    14 CSW01_00695 EAL domain-containing protein -0.49
    15 CSW01_17095 protein acetyltransferase -0.48
    16 CSW01_02210 DUF3971 domain-containing protein -0.48
    17 CSW01_00655 2-haloalkanoic acid dehalogenase -0.47
    18 CSW01_01750 transporter -0.47
    19 CSW01_00685 lysophospholipase -0.46
    20 CSW01_01970 MBL fold metallo-hydrolase -0.46

    Or look for positive cofitness