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  • Negative cofitness for CSW01_12200 from Vibrio cholerae E7946 ATCC 55056

    ribosomal RNA small subunit methyltransferase H
    SEED: rRNA small subunit methyltransferase H
    KEGG: S-adenosyl-methyltransferase

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_19490 GGDEF domain-containing protein -0.76
    2 CSW01_02275 arginine:ornithine antiporter -0.74
    3 CSW01_14465 EamA/RhaT family transporter -0.73
    4 CSW01_07820 RidA family protein -0.73
    5 CSW01_08190 ABC transporter permease -0.73
    6 CSW01_12360 TIGR00153 family protein -0.72
    7 CSW01_15345 XRE family transcriptional regulator -0.72
    8 CSW01_16810 aspartate/tyrosine/aromatic aminotransferase -0.71
    9 CSW01_01250 polymerase -0.71
    10 CSW01_01255 acyltransferase -0.71
    11 CSW01_01300 sugar ABC transporter -0.71
    12 CSW01_01260 polysaccharide deacetylase -0.70
    13 CSW01_01185 ADP-heptose--LPS heptosyltransferase -0.70
    14 CSW01_11710 transcriptional regulator -0.70
    15 CSW01_11870 DNA repair protein RadA -0.70
    16 CSW01_14700 MFS transporter -0.70
    17 CSW01_03155 RNA polymerase-binding transcription factor DksA -0.70
    18 CSW01_11100 replication endonuclease -0.69
    19 CSW01_01290 rfbG protein -0.69
    20 CSW01_01265 ADP-L-glycero-D-mannoheptose-6-epimerase -0.69

    Or look for positive cofitness