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  • Negative cofitness for CSW01_12075 from Vibrio cholerae E7946 ATCC 55056

    RNA-directed DNA polymerase
    SEED: Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)
    KEGG: RNA-directed DNA polymerase

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_17805 molybdate ABC transporter substrate-binding protein -0.49
    2 CSW01_08775 hypothetical protein -0.48
    3 CSW01_07605 molecular chaperone -0.47
    4 CSW01_04690 MexH family multidrug efflux RND transporter periplasmic adaptor subunit -0.45
    5 CSW01_01710 Rsd/AlgQ family anti-sigma factor -0.45
    6 CSW01_04155 ferredoxin family protein -0.44
    7 CSW01_03435 protease -0.44
    8 CSW01_10990 phage tail tape measure protein -0.44
    9 CSW01_06085 urocanate hydratase -0.43
    10 CSW01_17730 TMAO reductase system periplasmic protein TorT -0.43
    11 CSW01_01825 DNA mismatch repair protein MutL -0.43
    12 CSW01_07450 Lon protease family protein -0.43
    13 CSW01_16980 hypothetical protein -0.43
    14 CSW01_02515 transketolase -0.42
    15 CSW01_06905 GGDEF domain-containing protein -0.42
    16 CSW01_14750 peptide deformylase -0.42
    17 CSW01_05820 alcohol dehydrogenase -0.42
    18 CSW01_11580 sigma factor-binding protein Crl -0.42
    19 CSW01_19025 LysR family transcriptional regulator -0.42
    20 CSW01_14925 hypothetical protein -0.42

    Or look for positive cofitness