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  • Negative cofitness for CSW01_12065 from Vibrio cholerae E7946 ATCC 55056

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_08105 type IV pilus biogenesis/stability protein PilW -0.63
    2 CSW01_14140 type VI secretion system tip protein VgrG -0.62
    3 CSW01_08760 NAD-dependent succinate-semialdehyde dehydrogenase -0.58
    4 CSW01_10255 cytochrome c-type biogenesis protein CcmH -0.58
    5 CSW01_17715 MFS transporter -0.58
    6 CSW01_13305 shikimate kinase -0.58
    7 CSW01_07955 catalase -0.57
    8 CSW01_06450 histidine kinase -0.57
    9 CSW01_17495 glycerol-3-phosphate dehydrogenase -0.55
    10 CSW01_18750 methyl-accepting chemotaxis protein -0.55
    11 CSW01_04080 hypothetical protein -0.55
    12 CSW01_05070 N-acetylglucosamine-6-phosphate deacetylase -0.54
    13 CSW01_07580 hypothetical protein -0.54
    14 CSW01_17475 PTS maltose transporter subunit IIBC -0.54
    15 CSW01_04160 NAD(P)/FAD-dependent oxidoreductase -0.54
    16 CSW01_02165 MSHA pilin protein MshD -0.54
    17 CSW01_08890 YafY family transcriptional regulator -0.54
    18 CSW01_15185 Cof-type HAD-IIB family hydrolase -0.54
    19 CSW01_06400 DUF1513 domain-containing protein -0.54
    20 CSW01_16850 hybrid sensor histidine kinase/response regulator -0.54

    Or look for positive cofitness