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  • Negative cofitness for CSW01_12015 from Vibrio cholerae E7946 ATCC 55056

    TIGR01212 family radical SAM protein
    SEED: COG1242: Predicted Fe-S oxidoreductase

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_14945 2-hydroxyacid dehydrogenase -0.61
    2 CSW01_18710 hemin ABC transporter substrate-binding protein -0.60
    3 CSW01_05050 transcription/translation regulatory transformer protein RfaH -0.60
    4 CSW01_18970 DUF2850 domain-containing protein -0.57
    5 CSW01_19000 ABC transporter ATP-binding protein -0.56
    6 CSW01_14535 RluA family pseudouridine synthase -0.56
    7 CSW01_18875 SM-20 protein -0.55
    8 CSW01_05500 response regulator -0.53
    9 CSW01_14980 DUF262 domain-containing protein -0.53
    10 CSW01_15010 ATP-dependent RNA helicase RhlE -0.52
    11 CSW01_17655 protein translocase subunit SecF -0.52
    12 CSW01_16150 hypothetical protein -0.52
    13 CSW01_17315 DNA-binding protein -0.52
    14 CSW01_16960 DUF475 domain-containing protein -0.52
    15 CSW01_07515 tail-specific protease -0.51
    16 CSW01_19585 phosphoethanolamine transferase -0.50
    17 CSW01_12860 thiamine/thiamine pyrophosphate ABC transporter permease ThiP -0.50
    18 CSW01_18805 hypothetical protein -0.50
    19 CSW01_19470 helix-turn-helix transcriptional regulator -0.50
    20 CSW01_05940 anthranilate phosphoribosyltransferase -0.50

    Or look for positive cofitness