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  • Negative cofitness for CSW01_11900 from Vibrio cholerae E7946 ATCC 55056

    phosphopentomutase
    SEED: Phosphopentomutase (EC 5.4.2.7)
    KEGG: phosphopentomutase

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_08105 type IV pilus biogenesis/stability protein PilW -0.66
    2 CSW01_02475 tyrosine--tRNA ligase -0.62
    3 CSW01_05310 DUF3379 domain-containing protein -0.59
    4 CSW01_10145 ribonuclease E -0.58
    5 CSW01_04080 hypothetical protein -0.58
    6 CSW01_11745 cysteine desulfurase sulfur acceptor subunit CsdE -0.57
    7 CSW01_15975 nitrate reductase -0.56
    8 CSW01_16130 acetyltransferase -0.56
    9 CSW01_19195 LysR family transcriptional regulator -0.56
    10 CSW01_17395 hypothetical protein -0.55
    11 CSW01_09300 prepilin peptidase -0.53
    12 CSW01_10170 MarC family protein -0.53
    13 CSW01_07280 RstC protein -0.52
    14 CSW01_10255 cytochrome c-type biogenesis protein CcmH -0.52
    15 CSW01_00570 cytochrome c4 -0.52
    16 CSW01_02410 adenine DNA glycosylase -0.52
    17 CSW01_02125 MSHA biogenesis protein MshM -0.51
    18 CSW01_08015 ABC transporter substrate-binding protein -0.51
    19 CSW01_08520 hypothetical protein -0.51
    20 CSW01_01980 transcriptional regulator Zur -0.50

    Or look for positive cofitness