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  • Negative cofitness for CSW01_11870 from Vibrio cholerae E7946 ATCC 55056

    DNA repair protein RadA
    SEED: DNA repair protein RadA
    KEGG: DNA repair protein RadA/Sms

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_05425 hypothetical protein -0.79
    2 CSW01_17095 protein acetyltransferase -0.76
    3 CSW01_02210 DUF3971 domain-containing protein -0.74
    4 CSW01_00790 vitamin B12 transporter BtuB -0.74
    5 CSW01_03100 TetR/AcrR family transcriptional regulator -0.72
    6 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) -0.72
    7 CSW01_01410 DUF1481 domain-containing protein -0.72
    8 CSW01_03510 NADP(H)-dependent aldo-keto reductase -0.71
    9 CSW01_12200 ribosomal RNA small subunit methyltransferase H -0.70
    10 CSW01_03465 GGDEF-domain containing protein -0.68
    11 CSW01_04820 serine hydroxymethyltransferase -0.68
    12 CSW01_10595 flagellar biosynthetic protein FliP -0.68
    13 CSW01_03695 ribosomal large subunit pseudouridine synthase D -0.67
    14 CSW01_00795 alkaline serine protease -0.67
    15 CSW01_01820 N-acetylmuramoyl-L-alanine amidase -0.67
    16 CSW01_00410 universal stress protein UspA -0.67
    17 CSW01_01555 ATP-dependent RNA helicase RhlB -0.67
    18 CSW01_06525 cyclic nucleotide-binding protein -0.67
    19 CSW01_03525 phosphoenolpyruvate-protein phosphotransferase PtsP -0.67
    20 CSW01_12005 aerobic respiration two-component sensor histidine kinase ArcB -0.67

    Or look for positive cofitness