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  • Negative cofitness for CSW01_11800 from Vibrio cholerae E7946 ATCC 55056

    hydroxyacid dehydrogenase
    SEED: DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS
    KEGG: hypothetical protein

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_05110 bacteriocin production protein -0.53
    2 CSW01_13550 O-succinylhomoserine (thiol)-lyase -0.52
    3 CSW01_07790 glycerol-3-phosphate transporter permease -0.51
    4 CSW01_10175 Aspartate-semialdehyde dehydrogenase 1 -0.50
    5 CSW01_03025 hypothetical protein -0.50
    6 CSW01_05560 ABC transporter ATP-binding protein -0.50
    7 CSW01_04000 isochorismatase -0.49
    8 CSW01_07560 DUF4442 domain-containing protein -0.49
    9 CSW01_05075 PTS N-acetylmuramic acid transporter subunit IIBC -0.48
    10 CSW01_03620 beta-hexosaminidase -0.48
    11 CSW01_13630 type II secretion protein -0.48
    12 CSW01_13835 ATPase -0.48
    13 CSW01_12270 prepilin-type cleavage/methylation domain-containing protein -0.47
    14 CSW01_00045 amino acid ABC transporter permease -0.47
    15 CSW01_06660 two-component sensor histidine kinase -0.47
    16 CSW01_00645 DUF484 domain-containing protein -0.46
    17 CSW01_08045 hypothetical protein -0.46
    18 CSW01_09080 transcriptional regulator -0.46
    19 CSW01_05860 response regulator -0.46
    20 CSW01_07530 ABC transporter ATP-binding protein -0.45

    Or look for positive cofitness