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  • Negative cofitness for CSW01_11775 from Vibrio cholerae E7946 ATCC 55056

    exodeoxyribonuclease V subunit alpha
    SEED: Exodeoxyribonuclease V alpha chain (EC 3.1.11.5)
    KEGG: exodeoxyribonuclease V alpha subunit

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_03100 TetR/AcrR family transcriptional regulator -0.63
    2 CSW01_01545 hybrid sensor histidine kinase/response regulator -0.59
    3 CSW01_04590 transcriptional regulator GcvA -0.58
    4 CSW01_18300 LysR family transcriptional regulator -0.57
    5 CSW01_03525 phosphoenolpyruvate-protein phosphotransferase PtsP -0.56
    6 CSW01_18620 metal-dependent phosphohydrolase -0.52
    7 CSW01_00790 vitamin B12 transporter BtuB -0.48
    8 CSW01_01470 permease -0.47
    9 CSW01_05795 cold-shock protein CspD -0.46
    10 CSW01_05425 hypothetical protein -0.46
    11 CSW01_01410 DUF1481 domain-containing protein -0.46
    12 CSW01_01715 NADH pyrophosphatase -0.43
    13 CSW01_03670 biofilm architecture maintenance protein MbaA -0.42
    14 CSW01_03805 polyphosphate kinase 2 -0.42
    15 CSW01_00240 LysM peptidoglycan-binding domain-containing protein -0.42
    16 CSW01_02060 methionine synthase -0.42
    17 CSW01_03745 ferredoxin -0.41
    18 CSW01_02100 RNase E specificity factor CsrD -0.41
    19 CSW01_00795 alkaline serine protease -0.41
    20 CSW01_04605 LOG family protein -0.40

    Or look for positive cofitness