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  • Negative cofitness for CSW01_11735 from Vibrio cholerae E7946 ATCC 55056

    DJ-1 family protein
    SEED: DJ-1/YajL/PfpI superfamily, includes chaperone protein YajL (former ThiJ), parkinsonism-associated protein DJ-1, peptidases PfpI, Hsp31
    KEGG: 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_14420 peptidase M23 -0.64
    2 CSW01_05755 histidinol-phosphate transaminase -0.60
    3 CSW01_12580 glycosyltransferase -0.58
    4 CSW01_09160 mannose-6-phosphate isomerase, class I -0.58
    5 CSW01_18780 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC -0.58
    6 CSW01_16660 hypothetical protein -0.56
    7 CSW01_14435 MFS transporter -0.56
    8 CSW01_06085 urocanate hydratase -0.56
    9 CSW01_06715 tripartite tricarboxylate transporter permease -0.55
    10 CSW01_10040 hypothetical protein -0.55
    11 CSW01_14390 GGDEF domain-containing protein -0.53
    12 CSW01_18595 VOC family protein -0.53
    13 CSW01_02255 C4-dicarboxylate ABC transporter substrate-binding protein -0.53
    14 CSW01_02855 sulfate/thiosulfate ABC transporter permease CysT -0.53
    15 CSW01_09965 DUF2989 domain-containing protein -0.52
    16 CSW01_14205 methyl-accepting chemotaxis protein -0.52
    17 CSW01_11600 aminoacyl-histidine dipeptidase -0.52
    18 CSW01_10970 phage tail protein -0.52
    19 CSW01_13495 MATE family efflux transporter -0.51
    20 CSW01_13470 transcriptional regulator -0.51

    Or look for positive cofitness