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  • Negative cofitness for CSW01_11335 from Vibrio cholerae E7946 ATCC 55056

    23S rRNA pseudouridine(2604) synthase RluF
    SEED: Ribosomal large subunit pseudouridine synthase F (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase F

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_15255 copper-binding protein -0.70
    2 CSW01_18095 enoyl-[acyl-carrier-protein] reductase FabV -0.61
    3 CSW01_09770 LysR family transcriptional regulator -0.60
    4 CSW01_01920 bacterioferritin -0.58
    5 CSW01_10250 c-type cytochrome biogenesis protein CcmI -0.57
    6 CSW01_17750 cytochrome B -0.56
    7 CSW01_02455 YggS family pyridoxal phosphate enzyme -0.56
    8 CSW01_09220 cyd operon protein YbgE -0.56
    9 CSW01_09075 hypothetical protein -0.55
    10 CSW01_16890 sensor histidine kinase KdpD -0.55
    11 CSW01_07990 GGDEF domain-containing protein -0.55
    12 CSW01_14755 oxidoreductase -0.54
    13 CSW01_10420 succinyl-CoA ligase subunit beta -0.53
    14 CSW01_12345 [glutamate--ammonia-ligase] adenylyltransferase -0.53
    15 CSW01_03030 cell division protein ZapE -0.53
    16 CSW01_03465 GGDEF-domain containing protein -0.53
    17 CSW01_17795 molybdenum import ATP-binding protein ModC -0.53
    18 CSW01_07870 ABC transporter ATP-binding protein -0.53
    19 CSW01_18005 low-specificity L-threonine aldolase -0.52
    20 CSW01_10695 flagellin B -0.52

    Or look for positive cofitness