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  • Negative cofitness for CSW01_10415 from Vibrio cholerae E7946 ATCC 55056

    succinate--CoA ligase subunit alpha
    SEED: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
    KEGG: succinyl-CoA synthetase alpha subunit

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_10385 Fe(2+) transporter permease subunit FeoB -0.75
    2 CSW01_10770 methyl-accepting chemotaxis protein -0.74
    3 CSW01_10725 hypothetical protein -0.72
    4 CSW01_10180 Na+/H+ antiporter NhaC -0.72
    5 CSW01_05465 CPBP family intramembrane metalloprotease -0.72
    6 CSW01_10390 ferrous iron transport protein A -0.71
    7 CSW01_11710 transcriptional regulator -0.70
    8 CSW01_09860 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase -0.69
    9 CSW01_10175 Aspartate-semialdehyde dehydrogenase 1 -0.69
    10 CSW01_17140 urease -0.69
    11 CSW01_11275 NADPH-dependent ferric siderophore reductase -0.69
    12 CSW01_00215 potassium uptake protein TrkH -0.69
    13 CSW01_19095 DUF445 domain-containing protein -0.68
    14 CSW01_08190 ABC transporter permease -0.67
    15 CSW01_18205 dehydratase -0.67
    16 CSW01_00900 hypothetical protein -0.67
    17 CSW01_02835 RNA polymerase sigma factor RpoS -0.66
    18 CSW01_19630 spermidine/putrescine ABC transporter substrate-binding protein -0.66
    19 CSW01_08195 ABC transporter ATP-binding protein -0.66
    20 CSW01_19490 GGDEF domain-containing protein -0.66

    Or look for positive cofitness