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  • Negative cofitness for CSW01_09905 from Vibrio cholerae E7946 ATCC 55056

    long-chain-fatty-acid--CoA ligase FadD
    SEED: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
    KEGG: long-chain acyl-CoA synthetase

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_13860 nitrogen regulation protein NR(II) -0.63
    2 CSW01_17855 autoinducer 2 sensor kinase/phosphatase LuxQ -0.60
    3 CSW01_11535 thiamine-phosphate kinase -0.59
    4 CSW01_08170 aminotransferase class III -0.58
    5 CSW01_11870 DNA repair protein RadA -0.57
    6 CSW01_13410 protein-export protein SecB -0.56
    7 CSW01_07270 toxin-activating lysine-acyltransferase RtxC -0.56
    8 CSW01_04660 PTS trehalose transporter subunit IIBC -0.56
    9 CSW01_13470 transcriptional regulator -0.55
    10 CSW01_03155 RNA polymerase-binding transcription factor DksA -0.55
    11 CSW01_13980 LysR family transcriptional regulator -0.55
    12 CSW01_13970 fatty acid oxidation complex subunit alpha FadB -0.55
    13 CSW01_09695 LysE family translocator -0.55
    14 CSW01_01265 ADP-L-glycero-D-mannoheptose-6-epimerase -0.55
    15 CSW01_13680 DNA helicase RecG -0.55
    16 CSW01_09245 Holliday junction branch migration protein RuvA -0.55
    17 CSW01_01185 ADP-heptose--LPS heptosyltransferase -0.55
    18 CSW01_01190 glycosyltransferase family 2 protein -0.54
    19 CSW01_08080 HlyD family secretion protein -0.54
    20 CSW01_01015 DNA helicase II -0.54

    Or look for positive cofitness