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  • Negative cofitness for CSW01_09640 from Vibrio cholerae E7946 ATCC 55056

    C4-dicarboxylate ABC transporter permease
    SEED: TRAP-type C4-dicarboxylate transport system, large permease component
    KEGG: C4-dicarboxylate transporter, DctM subunit

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_18710 hemin ABC transporter substrate-binding protein -0.62
    2 CSW01_11740 cysteine desulfurase CsdA -0.58
    3 CSW01_02455 YggS family pyridoxal phosphate enzyme -0.57
    4 CSW01_18240 mechanosensitive ion channel protein -0.56
    5 CSW01_01915 bacterioferritin-associated ferredoxin -0.55
    6 CSW01_04285 toxin coregulated pilus biosynthesis protein R -0.55
    7 CSW01_10290 cytochrome c biogenesis ATP-binding export protein CcmA -0.54
    8 CSW01_10255 cytochrome c-type biogenesis protein CcmH -0.54
    9 CSW01_09745 pvcA protein -0.53
    10 CSW01_02700 hypothetical protein -0.53
    11 CSW01_17585 periplasmic nitrate reductase electron transfer subunit -0.53
    12 CSW01_06390 thiol oxidoreductase -0.52
    13 CSW01_18665 permease -0.52
    14 CSW01_18335 sugar O-acetyltransferase -0.52
    15 CSW01_06400 DUF1513 domain-containing protein -0.51
    16 CSW01_17770 two-component sensor histidine kinase -0.51
    17 CSW01_00860 TetR/AcrR family transcriptional regulator -0.51
    18 CSW01_04080 hypothetical protein -0.51
    19 CSW01_15685 toxin -0.51
    20 CSW01_05425 hypothetical protein -0.51

    Or look for positive cofitness