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  • Negative cofitness for CSW01_09595 from Vibrio cholerae E7946 ATCC 55056

    peptidylprolyl isomerase
    SEED: Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8)
    KEGG: peptidyl-prolyl cis-trans isomerase D

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_06865 Cof-type HAD-IIB family hydrolase -0.73
    2 CSW01_08190 ABC transporter permease -0.71
    3 CSW01_11710 transcriptional regulator -0.70
    4 CSW01_10535 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC -0.69
    5 CSW01_18205 dehydratase -0.68
    6 CSW01_15000 rfbP protein -0.68
    7 CSW01_02275 arginine:ornithine antiporter -0.68
    8 CSW01_14315 helix-turn-helix-type transcriptional regulator -0.68
    9 CSW01_17760 DNA helicase IV -0.67
    10 CSW01_01295 ABC transporter permease -0.66
    11 CSW01_01245 lipopolysaccharide heptosyltransferase II -0.66
    12 CSW01_17855 autoinducer 2 sensor kinase/phosphatase LuxQ -0.66
    13 CSW01_01265 ADP-L-glycero-D-mannoheptose-6-epimerase -0.66
    14 CSW01_05180 tRNA-Asn -0.66
    15 CSW01_15345 XRE family transcriptional regulator -0.66
    16 CSW01_11700 hypothetical protein -0.65
    17 CSW01_11825 zinc transporter ZntB -0.65
    18 CSW01_01185 ADP-heptose--LPS heptosyltransferase -0.65
    19 CSW01_01300 sugar ABC transporter -0.65
    20 CSW01_03095 hypothetical protein -0.65

    Or look for positive cofitness