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  • Negative cofitness for CSW01_09320 from Vibrio cholerae E7946 ATCC 55056

    amino acid ABC transporter permease
    SEED: Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1)
    KEGG: polar amino acid transport system permease protein

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_09220 cyd operon protein YbgE -0.54
    2 CSW01_18525 integrase -0.52
    3 CSW01_14755 oxidoreductase -0.51
    4 CSW01_11330 DNA endonuclease SmrA -0.51
    5 CSW01_16655 hypothetical protein -0.50
    6 CSW01_08400 cystathionine beta-lyase -0.50
    7 CSW01_14785 proton-conducting membrane transporter -0.48
    8 CSW01_01535 hypothetical protein -0.48
    9 CSW01_03995 hypothetical protein -0.47
    10 CSW01_08730 phage-shock protein -0.46
    11 CSW01_19000 ABC transporter ATP-binding protein -0.46
    12 CSW01_09030 MarR family transcriptional regulator -0.46
    13 CSW01_19300 polymer-forming cytoskeletal family protein -0.45
    14 CSW01_18240 mechanosensitive ion channel protein -0.45
    15 CSW01_18830 DeoR/GlpR family transcriptional regulator -0.45
    16 CSW01_03645 PilZ domain-containing protein -0.45
    17 CSW01_07655 ABC transporter ATP-binding protein -0.44
    18 CSW01_14540 hypothetical protein -0.44
    19 CSW01_04755 glycosyltransferase -0.44
    20 CSW01_17405 efflux RND transporter periplasmic adaptor subunit -0.44

    Or look for positive cofitness