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  • Negative cofitness for CSW01_09285 from Vibrio cholerae E7946 ATCC 55056

    porin
    SEED: Outer membrane protein OmpT
    KEGG: outer membrane protein OmpT

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_11310 beta-N-acetylhexosaminidase -0.57
    2 CSW01_17760 DNA helicase IV -0.57
    3 CSW01_14555 type VI secretion system contractile sheath large subunit -0.57
    4 CSW01_06975 LysR family transcriptional regulator -0.57
    5 CSW01_15275 hypothetical protein -0.56
    6 CSW01_10175 Aspartate-semialdehyde dehydrogenase 1 -0.56
    7 CSW01_06435 C4-dicarboxylate ABC transporter -0.56
    8 CSW01_00925 ABC transporter permease -0.55
    9 CSW01_19140 organic hydroperoxide resistance protein -0.54
    10 CSW01_11695 peptidyl-prolyl cis-trans isomerase -0.54
    11 CSW01_11580 sigma factor-binding protein Crl -0.54
    12 CSW01_18945 LysR family transcriptional regulator -0.54
    13 CSW01_14045 ParA family protein -0.53
    14 CSW01_08815 AcrB/AcrD/AcrF family protein -0.53
    15 CSW01_11795 LysR family transcriptional regulator -0.53
    16 CSW01_09930 ATP-dependent DNA helicase -0.53
    17 CSW01_13300 3-dehydroquinate synthase -0.53
    18 CSW01_10760 glycine cleavage system transcriptional regulator -0.52
    19 CSW01_09855 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase -0.52
    20 CSW01_06865 Cof-type HAD-IIB family hydrolase -0.51

    Or look for positive cofitness