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  • Negative cofitness for CSW01_09245 from Vibrio cholerae E7946 ATCC 55056

    Holliday junction branch migration protein RuvA
    SEED: Holliday junction DNA helicase RuvA
    KEGG: holliday junction DNA helicase RuvA

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_03100 TetR/AcrR family transcriptional regulator -0.78
    2 CSW01_00790 vitamin B12 transporter BtuB -0.76
    3 CSW01_01545 hybrid sensor histidine kinase/response regulator -0.74
    4 CSW01_01410 DUF1481 domain-containing protein -0.70
    5 CSW01_05425 hypothetical protein -0.69
    6 CSW01_02210 DUF3971 domain-containing protein -0.68
    7 CSW01_03525 phosphoenolpyruvate-protein phosphotransferase PtsP -0.67
    8 CSW01_18300 LysR family transcriptional regulator -0.66
    9 CSW01_01750 transporter -0.64
    10 CSW01_00395 ribosomal RNA small subunit methyltransferase J -0.63
    11 CSW01_17095 protein acetyltransferase -0.63
    12 CSW01_01970 MBL fold metallo-hydrolase -0.63
    13 CSW01_00685 lysophospholipase -0.62
    14 CSW01_03510 NADP(H)-dependent aldo-keto reductase -0.62
    15 CSW01_02060 methionine synthase -0.62
    16 CSW01_10585 flagellar type III secretion system protein FliR -0.61
    17 CSW01_04590 transcriptional regulator GcvA -0.60
    18 CSW01_00695 EAL domain-containing protein -0.59
    19 CSW01_14530 SulP family inorganic anion transporter -0.59
    20 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) -0.59

    Or look for positive cofitness