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  • Negative cofitness for CSW01_09080 from Vibrio cholerae E7946 ATCC 55056

    transcriptional regulator
    SEED: Transcriptional regulator, AlpA like
    KEGG: prophage regulatory protein

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_18625 glucose-6-phosphate dehydrogenase -0.68
    2 CSW01_17020 hypothetical protein -0.66
    3 CSW01_06390 thiol oxidoreductase -0.62
    4 CSW01_02200 septum formation inhibitor Maf -0.61
    5 CSW01_12320 3',5'-cyclic-AMP phosphodiesterase -0.60
    6 CSW01_11240 flagella basal body P-ring formation protein FlgA -0.59
    7 CSW01_09005 regulator of ribonuclease activity A -0.59
    8 CSW01_10670 sigma-54-dependent Fis family transcriptional regulator -0.57
    9 CSW01_14730 C4-dicarboxylate ABC transporter substrate-binding protein -0.57
    10 CSW01_00005 hypothetical protein -0.57
    11 CSW01_06400 DUF1513 domain-containing protein -0.57
    12 CSW01_10585 flagellar type III secretion system protein FliR -0.56
    13 CSW01_16455 DJ-1/PfpI family protein -0.56
    14 CSW01_10350 flagellar biosynthesis protein FlhA -0.56
    15 CSW01_06570 serine transporter -0.55
    16 CSW01_05130 flagellar protein MotY -0.55
    17 CSW01_10630 flagella biosynthesis chaperone FliJ -0.55
    18 CSW01_16665 nucleotide pyrophosphohydrolase -0.55
    19 CSW01_10675 flagellar protein FliS -0.55
    20 CSW01_00015 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE -0.55

    Or look for positive cofitness