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  • Negative cofitness for CSW01_08380 from Vibrio cholerae E7946 ATCC 55056

    TIGR01621 family pseudouridine synthase
    SEED: Pseudouridine synthase
    KEGG: ribosomal large subunit pseudouridine synthase A

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_04425 general secretion pathway protein GspH -0.73
    2 CSW01_03245 ABC transporter ATP-binding protein -0.72
    3 CSW01_14465 EamA/RhaT family transporter -0.72
    4 CSW01_14510 oxidoreductase -0.71
    5 CSW01_09970 peptide-methionine (R)-S-oxide reductase -0.71
    6 CSW01_01295 ABC transporter permease -0.69
    7 CSW01_01300 sugar ABC transporter -0.69
    8 CSW01_19350 sulfite exporter TauE/SafE family protein -0.69
    9 CSW01_11825 zinc transporter ZntB -0.69
    10 CSW01_03975 exodeoxyribonuclease VII large subunit -0.69
    11 CSW01_14165 fucose 4-O-acetylase -0.68
    12 CSW01_04650 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase -0.68
    13 CSW01_19605 short chain dehydrogenase -0.68
    14 CSW01_11710 transcriptional regulator -0.68
    15 CSW01_13410 protein-export protein SecB -0.68
    16 CSW01_01420 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase -0.68
    17 CSW01_06025 phosphoribosylaminoimidazolesuccinocarboxamide synthase -0.68
    18 CSW01_06110 dsDNA-mimic protein -0.68
    19 CSW01_14125 1,4-alpha-glucan branching enzyme -0.68
    20 CSW01_01315 NAD-dependent alcohol dehydrogenase -0.68

    Or look for positive cofitness