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  • Negative cofitness for CSW01_08305 from Vibrio cholerae E7946 ATCC 55056

    diguanylate phosphodiesterase
    SEED: Response regulator VieA
    KEGG: c-di-GMP phosphodiesterase

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_17850 flagellar brake protein -0.51
    2 CSW01_09990 hypothetical protein -0.49
    3 CSW01_12120 8-oxo-dGTP diphosphatase MutT -0.48
    4 CSW01_16870 GTP-binding protein -0.48
    5 CSW01_16130 acetyltransferase -0.47
    6 CSW01_06430 ABC transporter substrate-binding protein -0.47
    7 CSW01_18080 ABC transporter permease -0.46
    8 CSW01_15300 D-alanyl-D-alanine carboxypeptidase -0.46
    9 CSW01_08845 chemotaxis protein MotB -0.46
    10 CSW01_10080 4-amino-4-deoxychorismate lyase -0.45
    11 CSW01_15685 toxin -0.45
    12 CSW01_06215 phosphoribosylglycinamide formyltransferase 2 -0.44
    13 CSW01_18775 hypothetical protein -0.43
    14 CSW01_18960 quercetin 2,3-dioxygenase -0.43
    15 CSW01_13540 malate dehydrogenase -0.43
    16 CSW01_17300 molybdopterin-synthase adenylyltransferase MoeB -0.43
    17 CSW01_07570 nucleotide-binding protein -0.43
    18 CSW01_11090 XRE family transcriptional regulator -0.43
    19 CSW01_19595 DNA-binding response regulator -0.42
    20 CSW01_00860 TetR/AcrR family transcriptional regulator -0.42

    Or look for positive cofitness