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  • Negative cofitness for CSW01_08130 from Vibrio cholerae E7946 ATCC 55056

    LysR family transcriptional regulator
    SEED: Cys regulon transcriptional activator CysB

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_01710 Rsd/AlgQ family anti-sigma factor -0.69
    2 CSW01_07805 DeoR/GlpR transcriptional regulator -0.65
    3 CSW01_02835 RNA polymerase sigma factor RpoS -0.64
    4 CSW01_13495 MATE family efflux transporter -0.61
    5 CSW01_02515 transketolase -0.60
    6 CSW01_18285 4a-hydroxytetrahydrobiopterin dehydratase -0.60
    7 CSW01_09620 trigger factor -0.60
    8 CSW01_12925 DUF2796 domain-containing protein -0.59
    9 CSW01_17690 NADH-dependent alcohol dehydrogenase -0.59
    10 CSW01_19545 chemotaxis protein CheW -0.58
    11 CSW01_09555 tRNA-(ms[2]io[6]A)-hydroxylase -0.58
    12 CSW01_08515 trimethylamine N-oxide reductase system protein TorE -0.58
    13 CSW01_16320 VOC family protein -0.58
    14 CSW01_09965 DUF2989 domain-containing protein -0.58
    15 CSW01_18780 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC -0.58
    16 CSW01_10325 protein phosphatase CheZ -0.56
    17 CSW01_13525 DNA-binding transcriptional regulator CytR -0.56
    18 CSW01_05480 hypothetical protein -0.56
    19 CSW01_07875 cytochrome BD ubiquinol oxidase subunit II -0.56
    20 CSW01_08195 ABC transporter ATP-binding protein -0.55

    Or look for positive cofitness