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  • Negative cofitness for CSW01_07930 from Vibrio cholerae E7946 ATCC 55056

    LysR family transcriptional regulator
    SEED: Hydrogen peroxide-inducible genes activator
    KEGG: LysR family transcriptional regulator, transcriptional activator of nhaA

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_14765 cation:proton antiporter -0.44
    2 CSW01_14645 D-ribose pyranase -0.44
    3 CSW01_09015 hypothetical protein -0.43
    4 CSW01_16955 bifunctional metallophosphatase/5'-nucleotidase -0.43
    5 CSW01_00515 hypothetical protein -0.42
    6 CSW01_11910 2-deoxyribose-5-phosphate aldolase -0.41
    7 CSW01_14890 peptidase T -0.41
    8 CSW01_09780 hypothetical protein -0.40
    9 CSW01_16920 hypothetical protein -0.40
    10 CSW01_14300 purine-nucleoside phosphorylase -0.39
    11 CSW01_01710 Rsd/AlgQ family anti-sigma factor -0.38
    12 CSW01_11635 DNA polymerase IV -0.38
    13 CSW01_07610 (Fe-S)-binding protein -0.38
    14 CSW01_07715 lipoprotein NlpC -0.37
    15 CSW01_13475 DUF3135 domain-containing protein -0.37
    16 CSW01_07685 DUF2960 domain-containing protein -0.37
    17 CSW01_08380 TIGR01621 family pseudouridine synthase -0.36
    18 CSW01_06560 6-carboxytetrahydropterin synthase QueD -0.36
    19 CSW01_08775 hypothetical protein -0.35
    20 CSW01_01450 methyl-accepting chemotaxis protein -0.35

    Or look for positive cofitness