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  • Negative cofitness for CSW01_07840 from Vibrio cholerae E7946 ATCC 55056

    LysR family transcriptional regulator
    SEED: LysR-family transcriptional regulator VC1561

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_08530 RNA helicase -0.62
    2 CSW01_08395 cardiolipin synthase -0.62
    3 CSW01_05530 two-component system response regulator -0.61
    4 CSW01_08885 hypothetical protein -0.61
    5 CSW01_19490 GGDEF domain-containing protein -0.60
    6 CSW01_13525 DNA-binding transcriptional regulator CytR -0.59
    7 CSW01_13630 type II secretion protein -0.59
    8 CSW01_13470 transcriptional regulator -0.59
    9 CSW01_13960 potassium uptake protein TrkH -0.58
    10 CSW01_14165 fucose 4-O-acetylase -0.58
    11 CSW01_10470 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) -0.58
    12 CSW01_16675 N-acetyltransferase -0.58
    13 CSW01_14125 1,4-alpha-glucan branching enzyme -0.58
    14 CSW01_13860 nitrogen regulation protein NR(II) -0.58
    15 CSW01_19575 ABC transporter permease -0.58
    16 CSW01_09185 tol-pal system protein YbgF -0.58
    17 CSW01_09820 MFS transporter -0.57
    18 CSW01_17690 NADH-dependent alcohol dehydrogenase -0.57
    19 CSW01_05280 uridine kinase -0.57
    20 CSW01_17355 D-3-phosphoglycerate dehydrogenase -0.57

    Or look for positive cofitness