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  • Negative cofitness for CSW01_07190 from Vibrio cholerae E7946 ATCC 55056

    transcriptional regulator FNR
    SEED: Fumarate and nitrate reduction regulatory protein
    KEGG: CRP/FNR family transcriptional regulator, anaerobic regulatory protein

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_10620 flagellar hook-length control protein FliK -0.73
    2 CSW01_10335 RNA polymerase sigma factor FliA -0.73
    3 CSW01_10680 flagellar protein FliT -0.72
    4 CSW01_02110 MSHA biogenesis protein MshJ -0.69
    5 CSW01_02130 MSHA biogenesis protein MshN -0.69
    6 CSW01_02135 MSHA biogenesis protein MshE -0.68
    7 CSW01_10700 flagellin D -0.68
    8 CSW01_02180 MSHA biogenesis protein MshQ -0.67
    9 CSW01_02170 type II secretion system protein -0.67
    10 CSW01_10685 flagellar hook-associated protein 2 -0.67
    11 CSW01_02120 pilus (MSHA type) biogenesis protein MshL -0.66
    12 CSW01_02165 MSHA pilin protein MshD -0.66
    13 CSW01_17675 GGDEF domain-containing protein -0.65
    14 CSW01_02140 type II secretion system F family protein -0.65
    15 CSW01_02105 MSHA biogenesis protein MshI -0.65
    16 CSW01_12245 bifunctional protein-disulfide isomerase/oxidoreductase DsbC -0.64
    17 CSW01_11170 flagellin A -0.64
    18 CSW01_02460 type IV pili twitching motility protein PilT -0.64
    19 CSW01_02115 MSHA biogenesis protein MshK -0.64
    20 CSW01_02160 MSHA pilin protein MshC -0.62

    Or look for positive cofitness