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  • Negative cofitness for CSW01_07090 from Vibrio cholerae E7946 ATCC 55056

    type VI secretion system tube protein Hcp
    KEGG: type VI secretion system secreted protein Hcp

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_14750 peptide deformylase -0.55
    2 CSW01_12925 DUF2796 domain-containing protein -0.54
    3 CSW01_10305 chemotaxis protein CheW -0.54
    4 CSW01_04155 ferredoxin family protein -0.52
    5 CSW01_08125 glutaredoxin family protein -0.51
    6 CSW01_05480 hypothetical protein -0.50
    7 CSW01_13605 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL -0.49
    8 CSW01_09875 5'-deoxynucleotidase -0.48
    9 CSW01_15245 histidine kinase -0.48
    10 CSW01_01725 TetR family transcriptional regulator -0.47
    11 CSW01_14220 HDOD domain-containing protein -0.47
    12 CSW01_09060 DUF2787 domain-containing protein -0.47
    13 CSW01_18930 alpha-ketoglutarate-dependent dioxygenase AlkB -0.46
    14 CSW01_06105 DUF3187 domain-containing protein -0.46
    15 CSW01_10325 protein phosphatase CheZ -0.46
    16 CSW01_11975 bifunctional aspartate kinase/homoserine dehydrogenase I -0.46
    17 CSW01_17030 competence protein ComFB -0.45
    18 CSW01_06580 aminodeoxychorismate synthase component 1 -0.45
    19 CSW01_07565 3-deoxy-7-phosphoheptulonate synthase -0.45
    20 CSW01_01425 phosphoribosylamine--glycine ligase -0.45

    Or look for positive cofitness