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  • Negative cofitness for CSW01_06950 from Vibrio cholerae E7946 ATCC 55056

    ATP-dependent RNA helicase HrpA
    SEED: ATP-dependent RNA helicase HrpA (EC 3.6.4.13)
    KEGG: ATP-dependent helicase HrpA

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_02835 RNA polymerase sigma factor RpoS -0.73
    2 CSW01_14700 MFS transporter -0.65
    3 CSW01_09860 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase -0.65
    4 CSW01_03475 ATP-dependent RNA helicase SrmB -0.64
    5 CSW01_00215 potassium uptake protein TrkH -0.64
    6 CSW01_05280 uridine kinase -0.63
    7 CSW01_11275 NADPH-dependent ferric siderophore reductase -0.63
    8 CSW01_10470 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) -0.63
    9 CSW01_06715 tripartite tricarboxylate transporter permease -0.62
    10 CSW01_04045 vibriobactin biosynthesis 4'-phosphopantetheinyl transferase VibD -0.62
    11 CSW01_13625 C4-dicarboxylate ABC transporter -0.62
    12 CSW01_11825 zinc transporter ZntB -0.62
    13 CSW01_01295 ABC transporter permease -0.61
    14 CSW01_17225 putative 2-aminoethylphosphonate ABC transporter permease subunit -0.61
    15 CSW01_09965 DUF2989 domain-containing protein -0.61
    16 CSW01_18205 dehydratase -0.61
    17 CSW01_06090 formimidoylglutamase -0.60
    18 CSW01_07835 catalase-peroxidase -0.60
    19 CSW01_10770 methyl-accepting chemotaxis protein -0.60
    20 CSW01_09145 PTS fructose transporter subunit IIA -0.60

    Or look for positive cofitness