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  • Negative cofitness for CSW01_06820 from Vibrio cholerae E7946 ATCC 55056

    ribosomal RNA large subunit methyltransferase I
    SEED: LSU m5C1962 methyltransferase RlmI
    KEGG: ribosomal RNA large subunit methyltransferase I

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_18460 hypothetical protein -0.54
    2 CSW01_08120 M48 family peptidase -0.52
    3 CSW01_04850 septal ring lytic transglycosylase RlpA -0.50
    4 CSW01_19430 methyl-accepting chemotaxis protein -0.48
    5 CSW01_19485 sulfate adenylyltransferase -0.47
    6 CSW01_19285 amino acid ABC transporter substrate-binding protein -0.45
    7 CSW01_08905 MurR/RpiR family transcriptional regulator -0.44
    8 CSW01_19240 DUF2999 domain-containing protein -0.44
    9 CSW01_07960 DUF417 domain-containing protein -0.44
    10 CSW01_03250 ABC transporter ATP-binding protein -0.43
    11 CSW01_00535 thiosulfate sulfurtransferase -0.42
    12 CSW01_04595 DUF423 domain-containing protein -0.41
    13 CSW01_11795 LysR family transcriptional regulator -0.41
    14 CSW01_14880 DsbA family protein -0.40
    15 CSW01_15005 HNH endonuclease -0.40
    16 CSW01_05785 23S rRNA pseudouridine synthase E -0.40
    17 CSW01_16930 YceI family protein -0.40
    18 CSW01_16845 nuclease SbcCD subunit C -0.40
    19 CSW01_14095 methyl-accepting chemotaxis protein -0.40
    20 CSW01_13865 nitrogen regulation protein NR(I) -0.39

    Or look for positive cofitness