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  • Negative cofitness for CSW01_06750 from Vibrio cholerae E7946 ATCC 55056

    2-methylaconitate cis-trans isomerase PrpF
    SEED: 2-methylaconitate isomerase
    KEGG: hypothetical protein

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_01195 ADP-heptose--LPS heptosyltransferase I -0.72
    2 CSW01_00900 hypothetical protein -0.70
    3 CSW01_03815 peroxidase -0.68
    4 CSW01_14280 DUF3302 domain-containing protein -0.66
    5 CSW01_05280 uridine kinase -0.66
    6 CSW01_01245 lipopolysaccharide heptosyltransferase II -0.66
    7 CSW01_01270 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase -0.66
    8 CSW01_01305 acyl carrier protein -0.66
    9 CSW01_01830 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA -0.65
    10 CSW01_01325 acetyltransferase -0.65
    11 CSW01_04045 vibriobactin biosynthesis 4'-phosphopantetheinyl transferase VibD -0.65
    12 CSW01_01260 polysaccharide deacetylase -0.65
    13 CSW01_09145 PTS fructose transporter subunit IIA -0.65
    14 CSW01_01360 sugar transferase -0.65
    15 CSW01_01280 GDP-mannose 4,6-dehydratase -0.65
    16 CSW01_02835 RNA polymerase sigma factor RpoS -0.65
    17 CSW01_01190 glycosyltransferase family 2 protein -0.65
    18 CSW01_01320 acyl-CoA reductase -0.65
    19 CSW01_01315 NAD-dependent alcohol dehydrogenase -0.65
    20 CSW01_01310 long-chain fatty acid--CoA ligase -0.65

    Or look for positive cofitness