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  • Negative cofitness for CSW01_05930 from Vibrio cholerae E7946 ATCC 55056

    tryptophan synthase subunit beta
    SEED: Tryptophan synthase beta chain (EC 4.2.1.20)
    KEGG: tryptophan synthase beta chain

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_04815 YitT family protein -0.77
    2 CSW01_19490 GGDEF domain-containing protein -0.76
    3 CSW01_15000 rfbP protein -0.75
    4 CSW01_15275 hypothetical protein -0.74
    5 CSW01_03975 exodeoxyribonuclease VII large subunit -0.73
    6 CSW01_01295 ABC transporter permease -0.73
    7 CSW01_06635 transporter -0.73
    8 CSW01_14465 EamA/RhaT family transporter -0.72
    9 CSW01_07510 hypothetical protein -0.72
    10 CSW01_19545 chemotaxis protein CheW -0.71
    11 CSW01_11710 transcriptional regulator -0.71
    12 CSW01_01300 sugar ABC transporter -0.71
    13 CSW01_14510 oxidoreductase -0.70
    14 CSW01_14165 fucose 4-O-acetylase -0.69
    15 CSW01_14340 S9 family peptidase -0.69
    16 CSW01_15345 XRE family transcriptional regulator -0.68
    17 CSW01_03095 hypothetical protein -0.68
    18 CSW01_14125 1,4-alpha-glucan branching enzyme -0.68
    19 CSW01_19540 chemotaxis protein CheW -0.68
    20 CSW01_05250 zinc/cadmium/mercury/lead-transporting ATPase -0.68

    Or look for positive cofitness