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  • Negative cofitness for CSW01_05925 from Vibrio cholerae E7946 ATCC 55056

    tryptophan synthase subunit alpha
    SEED: Tryptophan synthase alpha chain (EC 4.2.1.20)
    KEGG: tryptophan synthase alpha chain

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_10725 hypothetical protein -0.83
    2 CSW01_01300 sugar ABC transporter -0.82
    3 CSW01_05465 CPBP family intramembrane metalloprotease -0.82
    4 CSW01_11710 transcriptional regulator -0.82
    5 CSW01_01295 ABC transporter permease -0.81
    6 CSW01_01390 mannose-6-phosphate isomerase, class I -0.79
    7 CSW01_01270 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase -0.79
    8 CSW01_01255 acyltransferase -0.78
    9 CSW01_01260 polysaccharide deacetylase -0.78
    10 CSW01_04045 vibriobactin biosynthesis 4'-phosphopantetheinyl transferase VibD -0.78
    11 CSW01_00900 hypothetical protein -0.78
    12 CSW01_01315 NAD-dependent alcohol dehydrogenase -0.78
    13 CSW01_17140 urease -0.78
    14 CSW01_01285 perosamine synthetase -0.78
    15 CSW01_01275 phosphomannomutase/phosphoglucomutase -0.77
    16 CSW01_01290 rfbG protein -0.77
    17 CSW01_11275 NADPH-dependent ferric siderophore reductase -0.77
    18 CSW01_01310 long-chain fatty acid--CoA ligase -0.77
    19 CSW01_01345 glycosyl transferase family 1 -0.77
    20 CSW01_13210 TIGR02444 family protein -0.77

    Or look for positive cofitness