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  • Negative cofitness for CSW01_05785 from Vibrio cholerae E7946 ATCC 55056

    23S rRNA pseudouridine synthase E
    SEED: Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase E

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_06825 acylphosphatase -0.61
    2 CSW01_15810 hypothetical protein -0.51
    3 CSW01_13555 bifunctional aspartate kinase/homoserine dehydrogenase II -0.49
    4 CSW01_04060 alanine:cation symporter family protein -0.49
    5 CSW01_09360 methyl-accepting chemotaxis protein -0.48
    6 CSW01_01460 TonB-dependent siderophore receptor -0.48
    7 CSW01_14310 DUF1722 domain-containing protein -0.44
    8 CSW01_06320 competence/damage-inducible protein A -0.43
    9 CSW01_01725 TetR family transcriptional regulator -0.43
    10 CSW01_09280 DUF2057 domain-containing protein -0.42
    11 CSW01_08960 DNA repair protein RadC -0.42
    12 CSW01_11620 sodium-dependent transporter -0.41
    13 CSW01_06820 ribosomal RNA large subunit methyltransferase I -0.40
    14 CSW01_01035 gamma-glutamyltransferase -0.40
    15 CSW01_19435 hypothetical protein -0.40
    16 CSW01_03305 AcrB/AcrD/AcrF family protein -0.39
    17 CSW01_10740 peptidase M15 -0.39
    18 CSW01_12275 type IV-A pilus assembly ATPase PilB -0.38
    19 CSW01_01100 PTS N-acetylmuramic acid EIIBC component -0.38
    20 CSW01_01055 hypothetical protein -0.38

    Or look for positive cofitness