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  • Negative cofitness for CSW01_05620 from Vibrio cholerae E7946 ATCC 55056

    prepilin peptidase
    SEED: Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1)
    KEGG: uncharacterized protein

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_07480 ribosomal RNA large subunit methyltransferase K/L -0.66
    2 CSW01_04520 aminobenzoyl-glutamate transporter -0.63
    3 CSW01_08260 hypothetical protein -0.62
    4 CSW01_19535 methyl-accepting chemotaxis protein -0.58
    5 CSW01_01355 UDP-glucose 4-epimerase -0.56
    6 CSW01_10390 ferrous iron transport protein A -0.56
    7 CSW01_18205 dehydratase -0.55
    8 CSW01_04425 general secretion pathway protein GspH -0.55
    9 CSW01_04125 citrate (pro-3S)-lyase subunit beta -0.55
    10 CSW01_19540 chemotaxis protein CheW -0.55
    11 CSW01_01405 DNA-binding protein HU-alpha -0.55
    12 CSW01_17295 molybdopterin molybdotransferase -0.54
    13 CSW01_16125 hypothetical protein -0.54
    14 CSW01_00400 hypothetical protein -0.54
    15 CSW01_02820 5'-nucleotidase SurE -0.53
    16 CSW01_03150 tRNA glutamyl-Q(34) synthetase GluQRS -0.53
    17 CSW01_15870 type II toxin-antitoxin system RelE/ParE family toxin -0.53
    18 CSW01_19105 TetR/AcrR family transcriptional regulator -0.53
    19 CSW01_06715 tripartite tricarboxylate transporter permease -0.53
    20 CSW01_10360 peptidase M16 -0.53

    Or look for positive cofitness