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  • Negative cofitness for CSW01_05565 from Vibrio cholerae E7946 ATCC 55056

    ABC transporter ATP-binding protein
    SEED: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)
    KEGG: peptide/nickel transport system ATP-binding protein

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_03100 TetR/AcrR family transcriptional regulator -0.55
    2 CSW01_05760 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase -0.54
    3 CSW01_13395 PadR family transcriptional regulator -0.50
    4 CSW01_04590 transcriptional regulator GcvA -0.50
    5 CSW01_18330 drug/metabolite DMT transporter permease -0.48
    6 CSW01_12280 type IV pilin assembly protein PilC -0.48
    7 CSW01_15595 hypothetical protein -0.46
    8 CSW01_09845 o-succinylbenzoate synthase -0.46
    9 CSW01_10200 DUF3413 domain-containing protein -0.45
    10 CSW01_05795 cold-shock protein CspD -0.44
    11 CSW01_18990 ATP-dependent protease -0.44
    12 CSW01_08280 hypothetical protein -0.44
    13 CSW01_08535 TIGR02647 family protein -0.43
    14 CSW01_03200 ammonium transporter -0.42
    15 CSW01_13650 DUF4212 domain-containing protein -0.42
    16 CSW01_10495 LrgB family protein -0.42
    17 CSW01_12370 SH3 domain-containing protein -0.41
    18 CSW01_16915 EAL domain-containing protein -0.41
    19 CSW01_06480 PTS sugar transporter -0.41
    20 CSW01_17235 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein -0.40

    Or look for positive cofitness