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  • Negative cofitness for CSW01_05395 from Vibrio cholerae E7946 ATCC 55056

    protease SohB
    SEED: Possible protease sohB (EC 3.4.21.-)
    KEGG: serine protease SohB

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_19490 GGDEF domain-containing protein -0.85
    2 CSW01_01300 sugar ABC transporter -0.83
    3 CSW01_01295 ABC transporter permease -0.83
    4 CSW01_11825 zinc transporter ZntB -0.83
    5 CSW01_10325 protein phosphatase CheZ -0.83
    6 CSW01_04815 YitT family protein -0.83
    7 CSW01_11710 transcriptional regulator -0.82
    8 CSW01_10390 ferrous iron transport protein A -0.81
    9 CSW01_14510 oxidoreductase -0.81
    10 CSW01_14125 1,4-alpha-glucan branching enzyme -0.80
    11 CSW01_06715 tripartite tricarboxylate transporter permease -0.80
    12 CSW01_00215 potassium uptake protein TrkH -0.80
    13 CSW01_03095 hypothetical protein -0.80
    14 CSW01_10725 hypothetical protein -0.79
    15 CSW01_01420 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase -0.79
    16 CSW01_06025 phosphoribosylaminoimidazolesuccinocarboxamide synthase -0.79
    17 CSW01_01315 NAD-dependent alcohol dehydrogenase -0.78
    18 CSW01_01275 phosphomannomutase/phosphoglucomutase -0.78
    19 CSW01_12330 ADP-ribose diphosphatase -0.78
    20 CSW01_01285 perosamine synthetase -0.78

    Or look for positive cofitness