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  • Negative cofitness for CSW01_05340 from Vibrio cholerae E7946 ATCC 55056

    LysR family transcriptional regulator
    SEED: Cyn operon transcriptional activator
    KEGG: LysR family transcriptional regulator, transcriptional activator AphB

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_10335 RNA polymerase sigma factor FliA -0.62
    2 CSW01_10680 flagellar protein FliT -0.61
    3 CSW01_04655 HTH-type transcriptional regulator TreR -0.61
    4 CSW01_10620 flagellar hook-length control protein FliK -0.61
    5 CSW01_12245 bifunctional protein-disulfide isomerase/oxidoreductase DsbC -0.60
    6 CSW01_10685 flagellar hook-associated protein 2 -0.58
    7 CSW01_10700 flagellin D -0.58
    8 CSW01_02165 MSHA pilin protein MshD -0.56
    9 CSW01_02220 metalloprotease TldD -0.56
    10 CSW01_11170 flagellin A -0.56
    11 CSW01_02110 MSHA biogenesis protein MshJ -0.54
    12 CSW01_10670 sigma-54-dependent Fis family transcriptional regulator -0.53
    13 CSW01_02135 MSHA biogenesis protein MshE -0.53
    14 CSW01_10580 flagellar biosynthesis protein FlhB -0.53
    15 CSW01_04575 flagellar motor protein PomA -0.53
    16 CSW01_17675 GGDEF domain-containing protein -0.52
    17 CSW01_12845 metalloprotease PmbA -0.51
    18 CSW01_10665 PAS domain-containing sensor histidine kinase -0.51
    19 CSW01_14085 transcriptional regulator -0.51
    20 CSW01_10345 flagellar biosynthesis protein FlhF -0.50

    Or look for positive cofitness