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  • Negative cofitness for CSW01_05315 from Vibrio cholerae E7946 ATCC 55056

    RNA polymerase subunit sigma
    SEED: RNA polymerase sigma-70 factor, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_14215 DUF839 domain-containing protein -0.61
    2 CSW01_07555 hypothetical protein -0.58
    3 CSW01_18285 4a-hydroxytetrahydrobiopterin dehydratase -0.57
    4 CSW01_04170 hypothetical protein -0.56
    5 CSW01_02505 SprT family protein -0.56
    6 CSW01_19390 3,4-dihydroxy-2-butanone-4-phosphate synthase -0.56
    7 CSW01_02625 inovirus Gp2 family protein -0.55
    8 CSW01_01030 AraC family transcriptional regulator -0.54
    9 CSW01_06410 hypothetical protein -0.53
    10 CSW01_07315 Zona occludens toxin -0.53
    11 CSW01_14675 nicotinamide mononucleotide transporter -0.53
    12 CSW01_08395 cardiolipin synthase -0.53
    13 CSW01_18780 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC -0.52
    14 CSW01_08885 hypothetical protein -0.51
    15 CSW01_13610 membrane protein FxsA -0.51
    16 CSW01_05280 uridine kinase -0.50
    17 CSW01_15920 DUF3265 domain-containing protein -0.49
    18 CSW01_19045 phosphoenolpyruvate synthase regulatory protein -0.49
    19 CSW01_18205 dehydratase -0.49
    20 CSW01_10395 AraC family transcriptional regulator -0.49

    Or look for positive cofitness