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  • Negative cofitness for CSW01_05050 from Vibrio cholerae E7946 ATCC 55056

    transcription/translation regulatory transformer protein RfaH
    SEED: Transcriptional activator RfaH
    KEGG: transcriptional antiterminator RfaH

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_12015 TIGR01212 family radical SAM protein -0.60
    2 CSW01_11400 lytic transglycosylase -0.48
    3 CSW01_11315 TraB/GumN family protein -0.46
    4 CSW01_10030 patatin family protein -0.46
    5 CSW01_09875 5'-deoxynucleotidase -0.45
    6 CSW01_07565 3-deoxy-7-phosphoheptulonate synthase -0.45
    7 CSW01_19555 response regulator -0.45
    8 CSW01_07445 macrodomain Ter protein MatP -0.45
    9 CSW01_11310 beta-N-acetylhexosaminidase -0.44
    10 CSW01_18945 LysR family transcriptional regulator -0.43
    11 CSW01_08645 two-component system response regulator TorR -0.43
    12 CSW01_05015 selenoprotein W-like protein -0.42
    13 CSW01_03145 polynucleotide adenylyltransferase PcnB -0.42
    14 CSW01_18735 hypothetical protein -0.42
    15 CSW01_18020 DEAD/DEAH box helicase -0.42
    16 CSW01_04630 hypothetical protein -0.42
    17 CSW01_07620 DUF3305 domain-containing protein -0.41
    18 CSW01_07795 sn-glycerol-3-phosphate ABC transporter permease UgpE -0.41
    19 CSW01_11885 phosphoserine phosphatase SerB -0.41
    20 CSW01_12720 ornithine carbamoyltransferase -0.40

    Or look for positive cofitness