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  • Negative cofitness for CSW01_04820 from Vibrio cholerae E7946 ATCC 55056

    serine hydroxymethyltransferase
    SEED: Serine hydroxymethyltransferase (EC 2.1.2.1)
    KEGG: glycine hydroxymethyltransferase

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_01245 lipopolysaccharide heptosyltransferase II -0.95
    2 CSW01_01320 acyl-CoA reductase -0.95
    3 CSW01_03470 peptide chain release factor 3 -0.95
    4 CSW01_01310 long-chain fatty acid--CoA ligase -0.95
    5 CSW01_01315 NAD-dependent alcohol dehydrogenase -0.95
    6 CSW01_01350 polysaccharide biosynthesis protein -0.95
    7 CSW01_01290 rfbG protein -0.95
    8 CSW01_01360 sugar transferase -0.95
    9 CSW01_01275 phosphomannomutase/phosphoglucomutase -0.95
    10 CSW01_01280 GDP-mannose 4,6-dehydratase -0.95
    11 CSW01_01285 perosamine synthetase -0.94
    12 CSW01_01325 acetyltransferase -0.94
    13 CSW01_01345 glycosyl transferase family 1 -0.94
    14 CSW01_01185 ADP-heptose--LPS heptosyltransferase -0.94
    15 CSW01_01305 acyl carrier protein -0.94
    16 CSW01_01250 polymerase -0.93
    17 CSW01_06025 phosphoribosylaminoimidazolesuccinocarboxamide synthase -0.93
    18 CSW01_01260 polysaccharide deacetylase -0.93
    19 CSW01_01295 ABC transporter permease -0.93
    20 CSW01_08445 ABC transporter substrate-binding protein -0.93

    Or look for positive cofitness