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  • Negative cofitness for CSW01_04790 from Vibrio cholerae E7946 ATCC 55056

    TetR family transcriptional regulator
    SEED: Capsular polysaccharide synthesis enzyme CpsB

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_05445 aldehyde dehydrogenase -0.62
    2 CSW01_18455 hemagglutinin/proteinase -0.59
    3 CSW01_12380 general secretion pathway protein GspA -0.53
    4 CSW01_09175 YecA family protein -0.52
    5 CSW01_05680 short-chain dehydrogenase -0.51
    6 CSW01_19395 histidine kinase -0.46
    7 CSW01_10965 phage tail protein -0.46
    8 CSW01_09025 transposase -0.45
    9 CSW01_00535 thiosulfate sulfurtransferase -0.45
    10 CSW01_12930 ABC transporter ATP-binding protein -0.45
    11 CSW01_02965 insulinase family protein -0.44
    12 CSW01_02945 oxaloacetate decarboxylase subunit alpha -0.44
    13 CSW01_02670 hypothetical protein -0.42
    14 CSW01_08740 acyl-CoA dehydrogenase -0.42
    15 CSW01_07615 DUF3306 domain-containing protein -0.41
    16 CSW01_16265 type II toxin-antitoxin system RelE/ParE family toxin -0.41
    17 CSW01_10820 bifunctional UDP-sugar hydrolase/5'-nucleotidase -0.41
    18 CSW01_01515 type II 3-dehydroquinate dehydratase -0.40
    19 CSW01_04630 hypothetical protein -0.40
    20 CSW01_08180 Na+/H+ antiporter NhaA -0.40

    Or look for positive cofitness