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  • Negative cofitness for CSW01_04740 from Vibrio cholerae E7946 ATCC 55056

    capsule biosynthesis protein CapK
    SEED: CapK protein, putative
    KEGG: phenylacetate-CoA ligase

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_17605 DNA-binding response regulator -0.49
    2 CSW01_18465 outer membrane protein W -0.44
    3 CSW01_13645 K+/H+ antiporter NhaP2 -0.43
    4 CSW01_07100 DUF4123 domain-containing protein -0.42
    5 CSW01_13355 DUF3624 domain-containing protein -0.40
    6 CSW01_13255 aminodeoxychorismate/anthranilate synthase component II -0.39
    7 CSW01_10785 hypothetical protein -0.39
    8 CSW01_19440 sodium/proline symporter PutP -0.38
    9 CSW01_16175 hypothetical protein -0.38
    10 CSW01_19455 AraC family transcriptional regulator -0.37
    11 CSW01_09790 septum site-determining protein MinD -0.37
    12 CSW01_06770 peptidase M20 -0.37
    13 CSW01_05850 DNA transformation protein -0.37
    14 CSW01_16250 C4-dicarboxylate ABC transporter -0.37
    15 CSW01_03195 transcriptional regulator -0.37
    16 CSW01_11715 RNA polymerase subunit sigma -0.37
    17 CSW01_03985 GMP synthase (glutamine-hydrolyzing) -0.36
    18 CSW01_15455 hypothetical protein -0.36
    19 CSW01_16075 hypothetical protein -0.35
    20 CSW01_01005 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ -0.35

    Or look for positive cofitness