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  • Negative cofitness for CSW01_04655 from Vibrio cholerae E7946 ATCC 55056

    HTH-type transcriptional regulator TreR
    SEED: Trehalose operon transcriptional repressor
    KEGG: LacI family transcriptional regulator, trehalose operon repressor

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_00855 MexH family multidrug efflux RND transporter periplasmic adaptor subunit -0.75
    2 CSW01_10180 Na+/H+ antiporter NhaC -0.75
    3 CSW01_09515 Na+/H+ antiporter NhaB -0.75
    4 CSW01_04660 PTS trehalose transporter subunit IIBC -0.73
    5 CSW01_01260 polysaccharide deacetylase -0.73
    6 CSW01_08190 ABC transporter permease -0.73
    7 CSW01_01250 polymerase -0.73
    8 CSW01_10360 peptidase M16 -0.73
    9 CSW01_01185 ADP-heptose--LPS heptosyltransferase -0.72
    10 CSW01_03155 RNA polymerase-binding transcription factor DksA -0.72
    11 CSW01_00620 class I adenylate cyclase -0.72
    12 CSW01_10325 protein phosphatase CheZ -0.71
    13 CSW01_11710 transcriptional regulator -0.71
    14 CSW01_01190 glycosyltransferase family 2 protein -0.71
    15 CSW01_10220 DNA topoisomerase III -0.71
    16 CSW01_01255 acyltransferase -0.71
    17 CSW01_18205 dehydratase -0.71
    18 CSW01_01245 lipopolysaccharide heptosyltransferase II -0.71
    19 CSW01_13470 transcriptional regulator -0.71
    20 CSW01_08615 Lrp/AsnC family transcriptional regulator -0.71

    Or look for positive cofitness