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  • Negative cofitness for CSW01_04555 from Vibrio cholerae E7946 ATCC 55056

    tRNA pseudouridine(65) synthase TruC
    SEED: tRNA pseudouridine synthase C (EC 4.2.1.70)
    KEGG: tRNA pseudouridine synthase C

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_14790 hypothetical protein -0.57
    2 CSW01_16180 hypothetical protein -0.54
    3 CSW01_15910 hypothetical protein -0.53
    4 CSW01_15195 PTS ascorbate-specific transporter subunit IIA -0.50
    5 CSW01_17730 TMAO reductase system periplasmic protein TorT -0.49
    6 CSW01_15165 DNA-binding response regulator -0.49
    7 CSW01_14650 ribose import ATP-binding protein RbsA -0.49
    8 CSW01_19420 coniferyl aldehyde dehydrogenase -0.48
    9 CSW01_16980 hypothetical protein -0.48
    10 CSW01_06705 opacity protein-related protein -0.47
    11 CSW01_15150 hypothetical protein -0.47
    12 CSW01_04600 flap endonuclease Xni -0.47
    13 CSW01_17685 chitinase -0.46
    14 CSW01_14735 C4-dicarboxylate ABC transporter permease -0.46
    15 CSW01_18150 transcription initiation factor TFIIIB -0.45
    16 CSW01_03065 ClpXP protease specificity-enhancing factor -0.45
    17 CSW01_14930 response regulator -0.45
    18 CSW01_14255 sodium/glutamate symporter -0.44
    19 CSW01_12940 DUF3299 domain-containing protein -0.44
    20 CSW01_04030 iron ABC transporter permease -0.44

    Or look for positive cofitness