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  • Negative cofitness for CSW01_04550 from Vibrio cholerae E7946 ATCC 55056

    pseudouridine synthase
    SEED: Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C)

    Computing cofitness values with 45 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 CSW01_14265 N-acetyltransferase -0.54
    2 CSW01_06490 6-phospho-beta-glucosidase -0.49
    3 CSW01_09540 methyltransferase -0.49
    4 CSW01_07505 aminopeptidase N -0.45
    5 CSW01_06290 vitamin B12 import ATP-binding protein BtuD -0.44
    6 CSW01_13245 arginine N-succinyltransferase -0.41
    7 CSW01_02570 hypothetical protein -0.41
    8 CSW01_05000 short-chain dehydrogenase -0.41
    9 CSW01_04535 N-acetyltransferase -0.40
    10 CSW01_03500 sigma-54-dependent Fis family transcriptional regulator -0.39
    11 CSW01_14890 peptidase T -0.39
    12 CSW01_18465 outer membrane protein W -0.39
    13 CSW01_12575 transcriptional regulator LeuO -0.38
    14 CSW01_10235 hypothetical protein -0.37
    15 CSW01_09285 porin -0.37
    16 CSW01_01115 ribonuclease PH -0.37
    17 CSW01_13330 pilus assembly protein PilM -0.36
    18 CSW01_13350 dihydrolipoyl dehydrogenase -0.35
    19 CSW01_18180 serine protease -0.35
    20 CSW01_16250 C4-dicarboxylate ABC transporter -0.35

    Or look for positive cofitness